What is the basic structure of a prokaryotic cell?
What is the basic structure of a Eukaryotic Cell?
What are the main differences between Prokaryotic and Eukaryotic Cells?
Define Bactera
What is the Taxonomy of E. Coli?
What are the morphologies of bacterial cells?
What is the bacterial capsule?
What is the Quellung Reaction?
In this method two dyes, crystal violet and india ink are used. The capsule is seen as a clear halo around the microorganism against the black background.
Anticapsular antibodies present in the serum reacts with carbohydrate material of the pneumococcal capsule, causing a microprecipitin reaction on the surface of theStreptococcus pneumoniae.This antigen-antibody reaction causes a change in the refractive index of the capsule so that it appears “swollen” and more visible.
What are Pili?
Hair like filaments (polymer of proteins [pilins])
Extends from cell membrane to the outside
Up to 2um length
Two types: Sex pili (long), common pili (short)[fimbriae]
Common pili (adhesins) – allow attachment to eukaryotic cell surface - resist flushing and evade immune systemTip structure at end corresponds to cell receptor.
Sex pili (conjugation tube) – facilitate the transfer of DNA between donor and recipient bacteria
Motility – twitching, gliding
Bacterial Cell Wall
Outer layer present in bacteria, mainly composed of peptidoglycan but also:
* Teichoic acid
* Lipoteichoic acid
* Polysaccharides
Peptidoglycan:
* N-acetylmuramic acid (NAM)
* N-acetylglucosamine (NAG)
* Amino acid crosslinks (lysine, alanine, glucosamine)
What is Techoic acid?
Glycopolymer embedded in peptidoglycan
Covalently linked to peptidoglycan
Linked to cell membrane through lipid anchor (lipotechoic acid)
Roles:
Contributes to cell wall rigidity
Maintain net negative charge – proton motive force
Resistance – B-lactam abx (antibiotics), high temperature, high salt concentration
What is the mycobacterium: Cell Wall
No outer membrane.
Peptidoglycan present but thinner than gram +ve
Arabinogalactan – sugars (D-arabinose, D-galactose). Found between peptidoglycan and lipid layer.
Outer lipid layer – primarily composed of mycolic acids (long chained fatty acids, covalently linked to arabinogalactan)
Low permeability, resistant to drying and chemicals
Glycolipids – interact with host cell receptors
Porins – movement of molecules through lipid layer.
Can’t be stained using standard means due to lipid layer.
Plasma/Cell Membrane
Cell membrane:
Phospholipid bilayer
Outer membrane (Gram -ve):
Phospholipid
Lipopolysaccharide (O-antigen, core polysaccharide, lipid A)
What are Flagella?
Filament: composed of protein flagellin
Hook: Curved attachment of filament to motor
Basal body (motor): anchors flagellum to cell membrane and cell wall. (300 RPS)
What are spores?
Formed by some gram positive organisms
Primarily for reproduction and dispersal
Form under specific conditions ()
Useful in identification
Resistant to enzymes, heat, radiation (endospores)
Can survive for long periods.
Bacteria produce a thick protective wall around them in adverse conditions.
The walls break when fovaourable conditons return.
Eg. Bacilli and Clostridium.
How do bacteria grow?
Binary Fission – (asexual)
Growth curve
Growth factors:
Temperature
pH
Nutrient availability
* Generation time: time taken for population to double
Describe the 4 stages of the growth curve
Lag phase:
Adaptation to new environment
Variable (bacteria vs environment)
RNA, enzyme synthesis
Log phase:
Doubling of population
Optimal conditions – faster growth (steeper curve)
Generation time (doubling time)
Stationary phase:
New cells = dying cells, growth halt
Lack of nutrients
Physical space
Waste products inhibiting growth
Decline phase:
Exponential decrease
No growth on fresh medium
How does temperature affect bacterial growth?
Enzymes: heat denatured, cold – slowed metabolism
Optimal, minimum and maximum temp
Thermophiles (heat loving): 45-80C (60)
Hyperthermophiles: 65-120C (88-106)
Mesophiles: 20-45C (37) [human pathogens]
Psychrophiles (cold loving): -20-20C (15)
Psychrotophs (cold tolerant): 0-35C (16)
How deos ph affect Bacterial growth?
Neutrophiles – pH (5.5 – 8)
Acidophiles – pH (0 – 5.5)
Alkaliphiles – pH (8 – 11.5)
How does O2 conc affect bacterial growth?
Obligate aerobes require the presence of atmospheric oxygen (20%) for their metabolism.
Microaerophiles require oxygen, but at a lower level than normal atmospheric levels – they only grow at levels of 2-10%.
Organisms that can grow in the absence of oxygen are referred to as anaerobes
facultative anaerobes are the most versatile, being able to grow in the presence
or absence of oxygen by switching their metabolism to match their environment.
Aerotolerant anaerobes can also grow in the presence or absence
of oxygen, exhibiting no preference.
Obligate anaerobes can only grow in the absence of oxygen and
find an oxygenated environment to be toxic.
How do bacterial genes differ from eukaryotic genes?
Which antibiotics make the bacterial DNA supercoil and how?
There are some antibiotics whose MOA is to inhibit bacterial type II topoisomerases:
Fluoroquinolones (Ciprofloxacin, Levofloxacin, Moxifloxacin)
inhibit type II topoisomerases (DNA gyrase and topoisomerase IV).
Which antibiotics inhibit ribosomal function and how?
There are some antibiotics whose MOA is to inhibit ribosomal function:
Aminoglycosides and Tetracycline
Inhibit by binding the small subunit.
Macrolides and Lincosamides
Inhibit by binding the large subunit.
What are the causes of genetic mutations?
Chemical agents; Three classes:
Nucleotide base analogues – lead to mispairing and DNA replication mistakes.
Frameshift mutagens – These changes cause addition or deletion of a single base also lead to replication mistakes.
DNA-reactive chemicals – These act directly on the DNA changing the chemical structure directly at the base. These abnormal bases may pair abnormally or not at all. Such a base may be removed from the backbone of the DNA.
Physical agents:
Heat, UV light,