What change to Histones Inc transcription? Dec?
Methylation decreases transciption, Acetylation increases transcription
Megaloblastic anemia that does not correct with Folate or Vit B12 administration
Orotic Aciduria Note: Deficiency in UMP Synthase–> increased orotic acid in urine and megaloblastic anemia (No hyperammonemia–>Ornithine Transcarbamolase Deficiency)
Intellectual Disability, Self Mutilation, Gout, dystonia
Lesch-Nyhan Syndrome Note: HGPRT deficiency, X-linked recessive
Removal of RNA Primer
DNA Pol I w/ 5’->3’ exonuclease activity
DNA proofreading
3’->5’ exonuclease activity Note: DNA Pol III and I;
Transition vs Transversion
Transition: Purine to Purine
Transversion: Purine to Pyrimidine
Xeroderma Pigmentosa
Defective Endonuclease repair of pyrimidine dimers Note: Increased risk for SqCC, Basal CC, Melanoma
Base Excision Repair Order of Enzymes
Glycosylase (removes altered base)
Endonuclease (5’) then Lyase (3’)
DNA Pol then DNA Ligase Note: repairs spontaneous/toxic deamination of bases
RNA Polymerase products
I: rRNA, II: mRNA, III:tRNA Note: Amantinin (mushroom toxin) inhibits RNA Pol II (mRNA synthesis–>hepatotoxic)
Nuclear modifications to mRNA
5’ Cap, 3’ Polyadenylation, Splicing Note: inital transcript is hnRNA (heterogenous nuclear RNA)
Cellular Structure that stores & Quality Controls mRNA
P-Bodies Note: contain exonucleases, decapping enzymes, and microRNAs
Antibodies to snRNPs in spliceosomes
Anti-Smith Ab – Lupus
Binds the AA on tRNA
CCA at 3’ end Note: Added as a post-translational modification, ATP used to charge the tRNA
tRNA structure
75-90 nucleotides, including Dihydrouricil and Pseudouridine Note: Dihydrouracil in D arm necessary for binding the correct aminoacyl-tRNA synthase
Mischarged tRNA outcome
Wrong AA at the correct codon
Energy for translocated derived from
GTP
Ribosome protein production
RER-secreted; free ribosomes-cytosolic/organellar Note: Mucus-secreting Goblet cells, Plasma cells, and Chief cells (stomach-pepsinogen) are rich in RER
Trafficing signal for Lysosomes
Mannose-6-Phosphate Note: Deficient in I cell disease–lysosomal proteins excreted, coarse facial features, clouded corneas, high plasma lysosomal enzymes, restricted joint movement, can be fatal
What does the Peroxisome catabolize
Very-long chain FA, Branch-chain FA, AA
Dynein Retrograde, Kinesin Anterograde
Dynein used by HSV for latency
Bronchiectasis/Recurrent Pulmonary infections, infertility, and Situs Inversus
Kartagener’s Disease Note: dynein arm defect in cilia
Level of what AA best reflects Collagen synthasis
Glycine (1/3 of collagen is glycine) Note: Gly-X-Y
Vitamin C deficiency effects collagen production where
RER Note: decreases hydroxylation of proline and lysine
Osteogenesis imperfecta where?
RER Note: Problems w/ formation of triple helix in RER (3 alpha chains)