Bacteria characteristics
Archaea characteristics
Eukarya characteristics
Epidemiology
who/what it infects
Physiology
chemical reactions in the organism
Natural Classification
Polyphasic taxonomy
classify microbes by phenetics, phylogenetics and genotype
Phenetic
phenotype (morphology, physiology)
Phylogenetic
compare evolutionary relationships by using the ribosomal gene structure.
- 18S rRNA for eukaryotes
- 16S rRNA for prokaryotes
Genotypic
compare genetic similarity of single genes or whole genome.
70% homology = similarity
Type strain
-first strain of the species with distinguishing characteristics
- all other strains in the species compared to this one
Biovars
strains that differ on basis of biochemistry and physiology
Morphovars
strains that differ in morphology
Morphological characteristics