Enzymes Flashcards

(48 cards)

1
Q

What are enzymes?

A

Biological catalysts that are globular process which lower activation energy causing reactions to occur at much faster rates

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2
Q

What are anabolic reactions?

A

The building up of large molecules from small molecules

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3
Q

What are catabolic reactions?

A

The breaking down of large molecules into smaller ones

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4
Q

What is metabolism?

A

The sum of all reactions and reaction pathways within a cell or organism

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5
Q

What is Vmax?

A

The maximum initial velocity or rate of enzyme catalysed reaction. The maximum rate of reaction of an enzyme

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6
Q

Explain the lock and key hypothesis

A

Specific substrate will fit the active site of one specific enzyme

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7
Q

What happens when an active site is bound to a substrate in the lock and key hypothesis?

A

Enzyme substrate complex is formed
Substrate and active site form temporary bonds between R groups (puts strain on bonds in the substrate)
Enzyme product complex formed

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8
Q

What does the induced fit hypothesis state?

A

Active site of enzyme slightly changes as substrate enters.

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9
Q

Explain, in terms of bonds, what happens during the induced fit hypothesis

A

Intitial interaction=weak
Enzymes tertiary structure strengthens bonding
Puts strain on bonds inside molecule, then weakens them
Lowers activation energy

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10
Q

What are intracellular enzymes?

A

Enzymes that work within cells

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11
Q

Give an example of an intracellular enzyme and what it breaks down

A

Catalase- breaks down hydrogen peroxide

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12
Q

What are extracellular enzymes?

A

Enzymes that work outside the cells they are produced in

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13
Q

Give 2 examples of extracellular enzymes and explain what they do

A

Amylase and Trypsin, break down the large molecules into smaller molecules so that they can be absorbed in the bloodstream and through cell membranes

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14
Q

Explain the process of starch digestion

A

1) Starch broken down into maltose via amylase in saliva and small intestine
2) Maltose is broken down into glucose via maltase in the small intestine
3) Glucose is absorbed into the cells in digestive system

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15
Q

What is trypsin and what is its role?

A

A protease that catalyses digestion of proteins

Produced in the pancreas, passes into small intestine in pancreatic juice

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16
Q

What does an increase in temperature do to enzyme activity? (not including too high temperatures that cause denaturation)

A

Increases kinetic energy of particles
More frequent collisions
More frequent successful collisions between enzyme and substrate
Increased rate of reaction

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17
Q

What is the temperature coefficient of a reaction?

A

A measure of how much the rate of reaction increases with a 10 C increase in temperature

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18
Q

What is the temperature coefficient for enzyme controlled reactions?

A

2

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19
Q

Explain how an enzyme becomes denatured by temperature in terms of bonds

A

Higher temperatures-bonds holding the protein together vibrate more
Vibrations increase
Bonds strain
Bonds break
Change in precise tertiary structure- conformational change

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20
Q

Why can an enzyme no longer react when it has been denatured?

A

Active site changes shape and is no longer complementary to substrate. Can’t bind. No function

21
Q

How are enzymes adapted to cold environments?

A

Flexible structures, specifically active site

22
Q

How are enzymes present in thermophiles adapted?

A

More stable due to increased number of bonds (hydrogen and disulfide bridges) in tertiary structures

23
Q

What is renaturation?

A

When pH changes from optimum temperatures the enzyme is denatured, however if pH returns to optimum levels the enzyme returns to original shape

24
Q

What happens to tertiary structure of an enzyme at low pH?

A

Less R groups are able to interact
Bonds break
Shape of enzyme changes- conformational change

25
What happens to tertiary structure of an enzyme at high pH?
R groups interact more Bonds form Shape of enzyme changes- conformational change
26
What happens when substrate concentration increases?
Increased collision rate More E-S complexes forming Rate of Reaction increases
27
What happens to enzyme activity at Vmax?
All active sites are occupied by substrate molecules No E-S complexes can be formed Other factors affecting rate of reaction
28
What are inhibitors?
Molecules that prevent/slow down enzyme carrying out normal function of catalysis
29
What happens during competitive inhibition?
A molecule has similar shape to substrate so has complementary shape to active site Blocks substrate from entering active site Enzyme can't catalyse reaction as fast as it is inhibited
30
Explain effect of competitive inhibition on rate of reaction
Reduces rate of reaction but substance still reaches Vmax
31
What does the degree of competitive inhibition depend on?
Substrate, enzyme and inhibitor concentration
32
Give 2 examples of competitive inhibitors and what they do
Statins- synthesise cholesterol | Aspirin- irreversibly inhibits the active site of COX enzymes preventing synthesis of prostaglandins and thromboxane
33
Explain how non-competitive inhibitors work
Inhibitor binds to allosteric site Causes conformational change in tertiary structure Active site no longer complementary to substrate Enzyme can't carry out function
34
What effect does non-competitive inhibition have on rate of reaction and Vmax?
Cannot reach Vmax Rate of reaction decreased, increasing concentration of inhibitor slows this further however increasing concentration of enzyme won't overcome effect
35
Give 2 examples of irreversible non-competitive inhibitors
Organophosphates- insecticides & herbicides | Proton pump inhibitors- treat long term indigestion
36
What is end-product inhibition?
Enzyme inhibition when product of a reaction acts as an inhibitor to the enzyme that produces it
37
What type of inhibition is end product inhibition?
Non-competitive reversible inhibition
38
Which metabolic pathway uses end-product inhibition?
Respiration
39
What do cofactors do?
Help enzymes function as biological catalysts by transferring groups from one to another or forming part of the active site of an enzyme
40
What are coenzymes?
Organic cofactors
41
Where are inorganic cofactors obtained from?
Diet as minerals eg iron, calcium, chloride and zinc
42
Where are coenzymes obtained from?
Vitamins
43
What are prosthetic groups in terms of enzymes?
Cofactors which are required by certain enzymes to carry out catalytic function
44
Give an example of a prosthetic group
Zn 2+ part of carbonic anhydrase
45
What is precursor activation?
Enzymes released inactivated that then undergo conformational change by adding cofactor to become activated
46
Give equation for precursor activation
Apoenzyme + Cofactor- Holoenzyme
47
What is a zymogen?
A type of precursor activation where a change in pH or temperature causes activation of enzyme
48
Give an example of a zymogen
Inactive pepsinogen released and activated by acid pH in the stomach