Lecture 13 Flashcards

Actin I (47 cards)

1
Q

What else are actin filaments known as?

A

Action filaments are also known as microfilaments

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2
Q

What are actin filaments?

A

Actin filaments are helical polymers of the protein actin.

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3
Q

Where is actin located?

A

Actin filaments are everywhere and are also very dynamic.

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4
Q

How long is one actin filament twist?

A

Each actin filaments twist is 25nm

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5
Q

What are actin subunits? What is an alternate name?

A

Actin subunits are polypeptides carrying a molecule of ATP or ADP.
- It is sometimes called globular or G-action

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6
Q

Actin is a _____?

A

Actin is an ATPase, meaning it can hydrolyze ATP.

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7
Q

What are some other names for actin filaments?

A

They are known as actin filaments, F-actin, and microfilaments.

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8
Q

What are actin filaments composed of?

A

Actin filaments are composed of G-actin monomers

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9
Q

Actin filaments are what shape?

A

Actin filaments are helicoidal

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10
Q

Why are G-actin monomers able to associate?

A

G-actin monomers can associate when ATP is hydrolysed.

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11
Q

What does the assembly of actin filament lend to the compiund?

A

The way that actin monomers assemble provides polarity to the actin filament.

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12
Q

How do actin filaments appear?

A

Actin filaments look symmetrical, but it’s not. It has a cleft that allows for ATP to bind.

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13
Q

Minus and Plus end of microfilament?

A
  • At the minus end the ATP-binding pocket is exposed
  • At the plus end the ATP-binding pocket is buried in the filament
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14
Q

G vs. F actin?

A

G actin = globular actin
F actin = filamentous actin

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15
Q

What orientation are actin molecules in?

A

They are all in the same direction stacked towards the plus end

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16
Q

Where does growth of the microfilament occur?

A

Growth happens mostly from the + end. We will see growth on the minus end but we will see a lot more growth on the plus end.

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17
Q

How do we observe growth of actin filaments?

A

We can label the actin with myosin heads and then mix it with actin monomers.

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18
Q

What is the rate limiting step in microfilament formation?

A

Nucleation is the rate-limiting step in the formation of actin filaments.
- Nucleation is slow and there’s not much affinity in between the monomers to begin with.

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19
Q

Difference in two vs three actin molecules binding?

A

Two actin molecules bind relatively weakly to another but the addition of a third action monomer makes the complex more stable.

1 and 2 = want to dissociate
3,4,5 = want to grow

20
Q

Net addition following nucleation?

A

Following nucleation, the filament then goes under a net addition of subunits at the plus end while simultaneously losing subunits from the minus end.
- The microfilaments are then always moving towards the plus end

21
Q

Hydrolysis on the minus and plus ends?

A

Minus end addition is slow and hydrolysis catches up (loss of actin)

Plus end addition is fast and hydrolysis lags behind (gain actin)

22
Q

What does actin treadmilling do?

A

Actin treadmilling pushed the membranes forward.

23
Q

What is phalloidin?

A

Phalloidin is a drug that stabilizes F-actin.
- It associates with actin and then it cannot grow and your cells wouldn’t be able to move so easily.
- It is found in death cap mushrooms

24
Q

How do cells assemble actin filaments?

A

Cells dynamically assemble actin filaments into a variety of structures that have difference mechanical properties and functions
- They move based on what they are needed for

25
Types of structures actin can form?
- Microvilli - Cell cortex (maintains shape) - Adherens belt - Filopodia (protecting) - Lamellipodium (leading edge - pushed membrane outward) - Cell cortex (maintains shape) - Stress fibres - Contractile ring (mitosis)
26
Migrating cells make what structures?
Migrating cells make protrusive structures termed filopodia and lamellipodia
27
Difference between lamellipodia and filopodia?
Lamellipodium = branched network Filopodium = tight parallel bundle
28
What is the role of actin-binding proteins?
Actin-binding proteins regulate polymerization and length of filaments
29
Actin-binding proteins (polymerization)?
Monomer-sequestering protiens - thymosin Actin-polymerizing protiens - formin
30
Actin-binding proteins (length)?
Filament-severing protiens - gelsolin Filament capping proteins - CapZ
31
What is the role of capping proteins?
Capping proteins prevent G-actin addition and loss. - An example is CapZ, a filament-capping protein
32
Where do capping proteins bind?
Capping proteins bind to the plus ends, thus preventing association and dissociation.
33
What is the composition of capping protiens?
Capping protein is a heterodimer that resembles two actin monomers
34
What is the role of cofilin?
Cofilin cuts actin filaments into small pieces
35
What does the crosslinking of actin accomplish?
Actin filament cross linking makes complex structures.
36
Examples of cross linked complex actin strucutres?
- Filopodia are made of actin bundles - Lamellipodium has complex actin networks
37
Examples of Filament-crosslinking proteins?
Filamin - present in lamellipodium
38
Examples of filament bundling proteins?
a-actinin and fimbrin - present in filopodia
39
What is alpha-actinic?
Alpha-actinin is a cross linking protien that makes F-actin bundles. - It is a dimer - Crosslinkers must have more than 2 actin binding sites - It is rigid
40
What is filamin?
Filamin is a flexible actin. cross linker protein. - Crosslinkers must have more than 2 actin binding sites - Filamin is a dimer - Flexibility allows different angles
41
What is the actin cytoskeleton linked to?
The actin cytoskeleton is linked to the membrane by ERM proteins
42
What are ERM protiens?
E = Erzin R = Radixin M = Moesin
43
What does Erzin do?
Binding sites for actin and membrane proteins are hidden, but they are revealed upon the phosphorylation of Erzin
44
What is the role of actin branching proteins?
The Arp2/3 complex promotes actin branching - Arp2/3 is composed of 7 subunits that are structurally similar to G-actin - it initiates a new branched filament by binding to the side of ta filament and recruiting actin monomers.
45
F actin is usually where?
F-actin structures usually are linked to the membrane
46
How do cells assemble complex actin structures?
Cells dynamically chaneg the activity and localization of actin-binding proteins to assemble complex actin structures.
47
migrating cells send what proteins where?
Migrating cells might send Arp2/3 proteins to the leading edge