Taxonomy
Homology vs analogy
Phylogeny
Systematists
a. Fossils
i. Ex. Archaeopteryx fossil – showing similarities between birds and Saurischian dinosaurs
b. Morphological data – doesn’t show homogenous DNA level
c. Biochemical data – more accurate; usually proteins
i. Ex. myoglobin proteins conserved in AA sequence and structure
d. Genetic data – more accurate; sequences diverge as species become more evolutionarily distant
i. E,x. DNA sequences – red differs
1. Human: atg gcc ctg tgg atg cgc ctc ccc ctg ctg gcg ctg gcg ctg
2. Chimp: atg gcc ctg tgg atg cgc ctc ccc ctg ctg gcg ctg gcg ctg
a. More similar to humans
3. Gorilla: atg gcc ctg tgg atg cgc ctc ccc ctg ctg gtg ctg gcg ctg
4. Dog: atg gcc ctc tgg atg cga ctc ccc ctg ctg gcc ctg gct ctg
a. The most distantly releated to humans
Research tools used to infer relationships
Cladistics
Shared ancestral vs shared derived
• Shared ancestral character – a character that originated in an ancestor
o Ex. vertebrate system of chordates – can be traced to all descendants
• Shared derived character – a character novel to a particular clade (not found in the ancestor)
o Ex. hair – not found on all descendants or in common ancestor
o Ancestor can be considered an outgroup if it lacks a character shared by all it’s descendants
• A character can be both ancestral and derived, depending on the context
Genome
Eukarya supergroups
The unikonta - 2 major clades
Two major clades
Animals
Grade vs clade
Clades – share a common ancestry
o Monophyletic clades – ancestor and all descendants
o Implies relationships – divergent evolution
Grades – share key biological feature only; usually come up through evolution to overcome obstacle
o No relationship between organisms
o Convergent evolution – unrelated groups finding similar solution to solving different problems
Eg. Coelom (body cavity), segmentation
10 major animal phylum - know the characteristics of each
Evolution of true tissues
Body cavities
Three grades of organization – occurred multiple times in different phyla to overcome obstacle
- Only in triploblastic animals – 3 germ layers
• The way they’re organized is a defining feature
Evolution of bilateral symmetry
Evolution of complete gut
2 openings
Evolution of segmentation
segmentation – identical repeating body units
Convergent evolution – found multiple times in bilaterians; unrelated or distantly related organisms evolving in similar body forms
• Present in 3/10 major animal phyla – Arthropoda, Annelida, Chordata (invertebrates)
• Derived character
Different genes are responsible for each segment
animal forms are limited by
o Strength – you need proper skeleton to support structure
o Diffusion – there are some that only get gas through diffusion of skin
More complex animals – cannot use diffusion across skin for oxygen supply
o Heat exchange
Birdmans rule – animals further north will have better body sizes that allow for heat retention
o Movement
Ex. swimming – convergent evolution in seals, penguins, tuna
4 adult tissue types
Regulators vs conformers
a. Regulation – staying the same; higher energy cost
i. Allows optimal function of proteins and enzymes
ii. Required energy from metabolism
b. Conformation – changes with external environment
i. Required less energy
ii. Proteins may function slightly less – but metabolism is lower functioning so not as many enzymes are required (catch 22 on which one is “better”)
Homeostasis – maintaining a steady state internal environment different from external; active disequilibrium
Nutrition requirements
Cellular work – all cells require ATP produces via cellular respiration; need: - Supply of reactants o Glucose o Oxygen - Waste removal system o Nitrogenous waste o Co2 o H2o – is a “waste” but doesn’t need to be removed because its used in other parts of the body - Mechanism to connect these
Nutrition
- Ingestive heterotrophy – animal eats other organisms to gain energy (can’t produce its own)
o Carbon compounds – ATP synthesis (especially Krebs); macromolecule synthesis
o Essential nutrients – essential AA (can’t be made by body); some fatty acids
o Vitamins & minerals – micronutrients (are only required in small amounts); often play a role in enzyme function
- Deficiencies – can be in everything; there are many symptoms depending on what’s missing
o Ex. lack of glucose – body was breakdown fats, then proteins (using proteins can be harmful)
Food processing
Feeding and dentition