Isomer? two main types
isomers are molecules or polyatomic ions with identical molecular formulae — that is, same number of atoms of each element — but distinct arrangements of atoms in space. Isomerism is existence or possibility of isomers.
◦ Isomers do not necessarily share similar chemical or physical properties. Two main forms of isomerism are structural or constitutional isomerism, in which bonds between the atoms differ; and stereoisomerism or spatial isomerism, in which the bonds are the same but the relative positions of the atoms differ.
What is a chiral molecule
◦ Cannot be superposed on its mirror image by any combination of rotations, translations, and some conformational changes
What is a stereoisomer?
is a form of isomerism in which molecules have the same molecular formula and sequence of bonded atoms (constitution), but differ in the three-dimensional orientations of their atoms in space
Do stereoisomers share the same chemical properties? Exceptions? Physical properties?
◦ A chiral molecule or ion exists in two stereoisomers that are mirror images of each other, called enantiomers; they are often distinguished as either “right-handed” or “left-handed” by their absolute configuration or some other criterion. The two enantiomers have the same chemical properties, except when reacting with other chiral compounds. They also have the same physical properties, except that they often have opposite optical activities.
Diastereoisomer
Enantiomer
Name 3 types of bonding between molecules
Define a weak acid
neutral molecule that can reversible dissociate into an anion (neg charge) and a proton e.g. aspirin
Define weak base
neutral molecule that can reversible for a. Cation (positively charged molecule) by combination with a proton
Define the law of mass action
When is a weak acid lipid soluble? When is a weak base lipid soluble?
◦ Protonated of weak acid is neutral (lipid soluble) –> in acidic environemnt
◦ Unprotonated base is lipid soluble –> in basic environment
Use an equation to define pH
pH = pKa - log (protonated/unprotonated)
If pH is < pKa then what effect does this have on the H + A <-> HA reaction
it is positive
pH = pKa - log (protonated/unprotonated)
Therefore if pH is less than pKa then log (protonated/unprotonated) is positive
What is an amine compound? What does a primary/secondary/tertiary refer to
A large number of drugs are weak bases, most are aminecontinaing molecules
* the nitrogen of a neutral amine has 3 atoms associated with it plus a pair of unshared electrons
◦ Primary amine - 1 carbon + 2 H —> can bind a further proton
◦ Secondary amine - 2 carbons, 1 H —> can bind a further proton
◦ Tertiary amine - 3 carbons —> can bind a further proton
◦ Quaternary amine - 4th carbon nitrogen bond - permanently charged and no unshared electrons with which to bind a proton i.e. poorly lipid soluble
Ficks law of diffusion
What is the diffusion coefficient related to in ficks law of diffusion
How thick is a cell membrane?
10nm
What is the henderson hasselbach equation
pKa is
pH at which 50% of the drug is ionised
Compre unionised and ionised drugs
Define ion trapping. E.g.
Different degrees of ionisation fo the same substance on each side of a menbrane that separates fluids with a different pH –> basic drugs across the placenta
Define absorption
the extent to which intact drug is absorbed from the gut lumen into portal circulation - expressed as a fraction fo the dose (f (g))
Define diffusion
the movement of drug molecules down their concentration gradient across the cell membrane without using energy
What is active transport