why is phylogenetics
use of genetic information to construct diagrams to find the relationship between, within species/inidivuals
what is phylogenetics used for?
taxonomy, evolutionary biology, conservation biology
terminal node
black ones, at the end of a leaf
internal node
hypothetic ancestor
root
common ancestor of the whole tree
branch
connects two nodes
branch length
amount of evolution between two nodes
degree
number of branches from an internal node
polytomy
node with more than three branches
fully resolved treee
no polytomies
hard polytomy
all decendents evolved simultaneously
soft polytomy
order of divergence is unknown
cladogram
length of branch means nothing, showing common ancestry
additive tree
branch tips, varying distances from root
branch lengths number of evolutionary changes
untrametric tree
kind of additive tree, all terminal nodes end up in same place, measures time since common ancestor
unrooted tree
no direction, still shows common ancestry