Unit 1 Flashcards

(34 cards)

1
Q

True or False: The centromere is always located in the middle of the chromosome.

A

FALSE

The centromere can be located at different positions on chromosomes.

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2
Q

What is the function of centromeres?

A

Promote assembly of the kinetochore complex

Centromeres are crucial for equal genome transmission to daughter cells.

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3
Q

What is the end-replication problem associated with linear chromosomes?

A

Loss of DNA at chromosome ends during replication

This problem is addressed by telomerase in eukaryotic cells.

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4
Q

What are the three parts required for linear chromosomes to function?

A
  • Origins of replication
  • Telomeres
  • Centromeres

These components are essential for proper chromosome function.

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5
Q

What is the approximate size of the human genome?

A

3.2 billion base pairs

This size allows for the encoding of approximately 20,000 genes.

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6
Q

How many proteins could be encoded in 3.2 billion base pairs if each protein requires 1500 nucleotides?

A

2,133,000

This calculation shows the potential protein coding capacity of the human genome.

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7
Q

What percentage of the human genome encodes proteins?

A

< 2%

The majority of the genome consists of non-coding regions.

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8
Q

What fraction of the human genome is repetitive?

A

55%

This includes both tandem and interspersed repeats.

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9
Q

What are the two types of repeats found in the human genome?

A
  • Tandem repeats
  • Interspersed repeats

These repeats play various roles in genome structure and function.

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10
Q

What are Short Sequence Repeats (SSRs) also known as?

A

Short Tandem Repeats (STRs)

SSRs are typically 2-5 base pairs in length.

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11
Q

What are Variable Number Tandem Repeats (VNTRs)?

A

Repeats of 15-100 base pairs in length

VNTRs are a type of tandem repeat found in the genome.

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12
Q

What is the typical length of Long Interspersed Elements (LINEs)?

A

300 bp to 6,000 bp

Most LINEs are approximately 300 bp in length.

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13
Q

What is the typical length of Short Interspersed Elements (SINEs)?

A

100-300 bp

SINEs are another type of interspersed repeat in the genome.

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14
Q

What is the bacterial solution to the end-replication problem?

A

Circular chromosomes

Bacteria have a single circular chromosome that does not have ends.

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15
Q

What is the eukaryotic solution to the end-replication problem?

A

Telomerase extends 3’ ends

This enzyme helps maintain chromosome integrity during replication.

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16
Q

What is the function of the kinetochore?

A

Attachment site for spindle microtubules

Kinetochores are essential for proper chromosome segregation during cell division.

17
Q

What happens if there is more than one centromere per chromosome?

A

It can lead to improper segregation during mitosis

This can result in aneuploidy or other chromosomal abnormalities.

18
Q

What is a holocentric chromosome?

A

A chromosome with kinetochores along its entire length

This allows for proper segregation during mitosis in certain species.

19
Q

What are the two types of chromosomes based on their structure?

A
  • Circular
  • Linear

Circular chromosomes are found in prokaryotes and some organelles, while linear chromosomes are characteristic of eukaryotes.

20
Q

In which organisms would you find circular chromosomes?

A
  • Prokaryotes (Bacteria)
  • Archaea (Archebacteria)

Circular chromosomes are typically found in prokaryotic organisms.

21
Q

In which organisms would you find linear chromosomes?

A
  • Eukaryote (Organellar)
  • Eukaryote (Genomic)

Linear chromosomes are characteristic of eukaryotic organisms.

22
Q

How is bacterial DNA packaged?

A
  • Loosely condensed
  • Compacted into a nucleoid
  • Supercoiling

Bacterial DNA is compacted using histone-like proteins and supercoiling.

23
Q

What is the compaction ratio of eukaryotic DNA in metaphase?

A

10,000x

This high level of compaction is necessary to fit DNA into the nucleus.

24
Q

What are the two forms of chromatin observed in eukaryotic cells?

A
  • 11 nm wide (Beads-on-a-string)
  • 30 nm wide (Zigzag or Solenoid)

These forms represent different levels of chromatin packaging.

25
What is the role of **nucleosomes** in DNA packaging?
They 'hide' the DNA coiled around them from transcription factors ## Footnote Nucleosomes play a crucial role in regulating gene expression.
26
What factors influence **nucleosome positioning**?
* Underlying DNA sequence * Binding of chromatin-associated proteins * Remodeling factors ## Footnote These factors determine how nucleosomes are arranged along the DNA.
27
True or false: **Chromatin compaction** can change in response to cellular signals.
TRUE ## Footnote Chromatin compaction can vary during development or due to disease-causing agents.
28
What are the two major types of **chromatin** identified through DNA staining?
* Euchromatin * Heterochromatin ## Footnote Euchromatin contains actively expressed genes, while heterochromatin contains silent genes.
29
What is the **Philadelphia Chromosome** associated with?
Chronic Myeloid Leukemia (CML) ## Footnote The Philadelphia Chromosome is a marker for CML, indicating a chromosomal abnormality.
30
What significant discovery did **Janet Rowley** make regarding CML?
Chromosomal translocation causing cancer ## Footnote Rowley's work demonstrated the link between chromosomal rearrangements and leukemia.
31
What technique did Janet Rowley use to enhance the resolution of chromosomal staining?
Fluorescent staining ## Footnote This technique allowed for better visualization of chromosomal abnormalities.
32
Fill in the blank: Eukaryotic DNA is highly condensed with a compaction ratio of _______ in metaphase.
10,000x ## Footnote This compaction is crucial for fitting DNA into the nucleus.
33
What is the **experimental evidence** for chromatin compaction in interphase?
* 11 nm fibers * 30 nm fibers ## Footnote These fibers represent different levels of chromatin structure during interphase.
34
What is the **function of histones** in chromatin structure?
They are basic building blocks with a net positive charge ## Footnote Histones play a key role in DNA packaging and regulation.