DNA Rep. (Notes) Flashcards

(47 cards)

1
Q

DNA is made up of

A

Nucleotides

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2
Q

Nucleotides are composed of

A
  1. Phosphate group
  2. 5-carbon sugar
  3. Nitrogenous base
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3
Q

Nitrogenous bases; Purines

A
  1. Adenine (A)
  2. Guanine (G)
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4
Q

Nitrogenous bases; Pyramidines

A
  1. Thymine (T)
  2. Cytosine (C)
  3. Uracil (U)
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5
Q

Chargaff’s rule

A

Adenine (A) must pair with Thymine (T)

Guanine (G) must pair with Cytosine (C)

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6
Q

When and where does DNA replication take place?

A

When: S phase in interphase of cell cycle

Where: nucleus of eukaryotes

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7
Q

☆ The origins of replication ☆

A
  1. Replication forks
  2. Replication Bubbles
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8
Q

☆ Helicase ☆

A

Enzyme that Unwinds the DNA strands -> zipper

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9
Q

☆ Single strand binding proteins (SSBP’s) ☆

A

Keeps separated strands apart -> tug-a-war with zipper

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10
Q

☆ Topoisomerase ☆

A

Enzyme that allows the DNA molecules to rotate

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11
Q

☆ Primase ☆

A

Enzyme that makes the RNA primer

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12
Q

☆ RNA Primers ☆

A

Anchor Point present to start addition of new nucleotides

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13
Q

☆ DNA polymerase ☆

A

With RNA in place; starts the making of a new DNA strand in the 5’ to free 3’ direction

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14
Q

☆ Leading strand ☆

A

Single polymer in 5’ -> 3’ direction

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15
Q

☆ Lagging strand ☆

A

Polymer 5’ -> 3’ direction discontinuously against overall direction

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16
Q

☆ Okazaki fragments ☆

A

Series of short segments on the lagging strand

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17
Q

☆ DNA ligase ☆

A

Linking enzyme that starts formation of covalent bond from 3’ -> 5’ end of joining strands

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18
Q

☆ Phases of protein synthesis ☆

A
  1. Transcription
  2. RNA processing
  3. Translation
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19
Q

Products of protein synthesis

A

DNA -> RNA -> Protein

20
Q

How does RNA differ from DNA

A

RNA; DNA;
- Ribose. - deoxyribose
- Uracil (U) - Thymine (T)
- single-stranded - double str.

21
Q

☆ Transcription ☆

A

The transfer of information from a DNA molecule To an (m)RNA molecule

22
Q

Where does transcription start and stop?

A

Start: promoter DNA (TATA BOX)
Stop: terminator DNA

23
Q

What enzyme is responsible for the production of the RNA molecule?

A

RNA polymerase

24
Q

RNA base pairing

A

Adenine (A) -> Uracil (U)

Guanine (G) -> Cytosine (C)

25
☆ RNA processing ☆process
Maturation of pre-RNA molecules Introns spliced out by splicesome-enzyme and exons come together End product: mature RNA molecule free to leave the womb (nucleus -> cytoplasm)
26
Types of RNA
A. Messenger (mRNA) - how to build a protein B. Transfer (tRNA) - transfers amino acid to ribosomes to build it C. Ribosome (rRNA) - building the protein with given info & materials ◇ all PRODUCED IN NUCLEUS ◇
27
mRNA
- Carries information for a protein - 500 - 100 Nucleotides long - made up of codons
28
tRNA
- 75 - 85 Nucleotides long - picks up appropriate amino acid floating in cytoplasm (activating enzyme) - transports amino acids to the mRNA - anticodons
29
Ribosomal (rRNA)
- 100 - 300 Nucleotides long - structural component of a ribosome - Associates with proteins to form ribosomes
30
Ribosomes
- composed of rRNA (40%) & proteins (60%) - large and small subunit come together to help BIND mRNA and tRNA
31
Two sites for tRNA
P site - first & last tRNA will attach A site - middle
32
☆ Translation ☆def
- synthesis of proteins in cytoplasm
33
☆ Translation involves the following... ☆
1. mRNA (condons) 2. tRNA (anticodons) 3. rRNA 4. ribosomes 5. amino acids
34
☆ Three parts of translation ☆
1. Initiation 2. Elongation 3. Termination
35
End product of protein synthesis
- primary structure of a protein - sequence of amino acids bonded together by peptide bonds (polypeptides)
36
Polyribosome
Group of ribosomes reading same mRNA simultaneously producing many proteins (polypeptides)
37
tRNA -> mRNA
A -> U C -> G
38
mRNA -> DNA
A -> T C -> G U -> A
39
tRNA -> DNA
U -> T (Keep rest the same)
40
☆ Transcription vs. Translation ☆ (Location, process, end prod)
Script: Nucleus, DNA --> mRNA using RNA polymerase. One's gene's code is copied, product = mRNA strand Lati: Ribosome (cytoplasm), mRNA codons read by tRNA, which brings specific amino acids, product = polypeptide chain (protein) Together performing protein synthesis
41
☆ Process of protein synthesis & structures involved ☆ [4steps]
1. DNA holds the code 2. Transcription: mRNA copies the code from DNA 3. Translation: tRNA matches codons with amino acids 5. Amino acids link to form a polypeptide chain
42
☆ mRNA vs. tRNA ☆ (function, structure, location)
M: carries the genetic code from DNA to RNA T: brings amino acids to ribosome during translation M: single, straight strand T: cloverleaf shape with anticodon region M: made in nucleus, used in cytoplasm T: found in cytoplasm M: Has codons that specify amino acids T: has anticodons that pair with codons
43
Purines
A, G
44
Pyramidines
T, C, U
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☆ DNA Replication steps ☆
1. Unwinding DNA 2. Priming DNA 3. Synthesizing new strands 4. Joining Fragments 5. Proofreading
46
☆☆ DNA Replication Parts (in order ☆☆
1. Replication forks 2. Replication bubbles 3. Helicase 4. Single-Strand Binding Proteins (SSBS) 5. Topoisomerase 6. Primase 7. RNA primers 8. DNA Polymerase 9. Leading strand 10. Lagging strand 11. Okazaki fragments 12. DNA Ligase 13. Proofreading
47
DNA --> .... --> ... --> ...
DNA --> mRNA --> tRNA --> amino acid