lab 5 Flashcards

(25 cards)

1
Q

What reaction does acid phosphatase catalyze?

A

Hydrolysis of pNPP (p‑nitrophenyl phosphate) into pNP (p‑nitrophenol) and phosphate.

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2
Q

Why does pNPP turn yellow during the reaction?

A

Produced pNP becomes yellow in alkaline conditions, allowing absorbance measurement at 405 nm.

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3
Q

What does reaction velocity (v) represent in this lab?

A

The rate of pNP formation over 15 minutes, expressed as µmoles/min.

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4
Q

How is the concentration of pNP determined?

A

From the absorbance using the standard curve relating A405 to pNP concentration.

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5
Q

What is the purpose of the Michaelis–Menten plot?

A

To show how reaction velocity changes with substrate concentration and estimate Vmax and Km.

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6
Q

What shape is the Michaelis–Menten curve?

A

A rectangular hyperbola that levels off as substrate concentration increases.

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7
Q

What does Vmax represent?

A

The maximal reaction rate when the enzyme is saturated with substrate.

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8
Q

What does Km represent?

A

The substrate concentration at which the reaction reaches half of Vmax.

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9
Q

How is Km estimated from the Michaelis–Menten plot?

A

Find ½Vmax on the y-axis and drop a line to the curve, then down to the x-axis.

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10
Q

What happens to Km and Vmax when enzyme concentration is halved?

A

Vmax is halved; Km stays the same because substrate affinity does not change.

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11
Q

What does a Lineweaver–Burk plot graph?

A

1/v versus 1/[S], producing a straight-line transformation of Michaelis–Menten kinetics.

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12
Q

How is Vmax determined from a Lineweaver–Burk plot?

A

Vmax = 1/(y-intercept).

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13
Q

How is Km determined from a Lineweaver–Burk plot?

A

Km = -1/(x-intercept).

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14
Q

What type of inhibitor is phosphate in this lab?

A

A competitive inhibitor.

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15
Q

How does a competitive inhibitor affect Km and Vmax?

A

It increases Km but does not change Vmax.

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16
Q

Why can competitive inhibition be overcome?

A

High substrate concentration outcompetes inhibitor for the active site.

17
Q

What type of inhibitor is NaF in this lab?

A

A non-competitive inhibitor.

18
Q

How does a non-competitive inhibitor affect Km and Vmax?

A

Vmax decreases while Km stays the same.

19
Q

Why can’t non-competitive inhibition be overcome by adding more substrate?

A

The inhibitor binds allosterically and reduces the amount of active enzyme.

20
Q

What does the Lineweaver–Burk plot look like for competitive inhibition?

A

Lines intersect on the y-axis; slope increases due to increased Km.

21
Q

What does the Lineweaver–Burk plot look like for non-competitive inhibition?

A

Lines intersect on the x-axis; Vmax decreases, Km unchanged.

22
Q

Why are Lineweaver–Burk values more accurate than conventional plots?

A

Linear transformation allows more precise determination of intercepts.

23
Q

What does an increased slope on a Lineweaver–Burk plot indicate?

A

Either increased Km (competitive inhibition) or decreased Vmax (non-competitive inhibition).

24
Q

Why must reaction rates be calculated over a fixed time?

A

To ensure comparisons are made while substrate is not depleted and enzyme remains stable.

25
Why are hyperbolic curves used for enzyme kinetics?
They reflect the saturation of enzyme active sites as substrate concentration increases.