Lecture 1 Flashcards

(16 cards)

1
Q

what are the subunits in DNA and RNA called and what are they made up of ?

A

called nucleotides and made u of a 5 carbon sugar ribose in rna; deoxyribose in DNA, nitrogenous base and a phosphate group

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2
Q

what are DNA and RNA bases?

A

DNA bases: Adenine, Guanine, Cytosine and Thymine
RNA bases : Adenine Guanine, Cytosine and Uracil

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3
Q

what is the difference between purines and pyrimidines

A

purines are DOUBLE carbon nitrogen rings and pyrimidines are SINGLE carbon nitrogen ring

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4
Q

What are chargaff’s rules ?

A

A=T, G=C, G+A= T+C

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5
Q

what forms a nucleic acid chain ?

A

phosphodiester linkages between nucleotides to form DNA or RNA

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6
Q

what is watson-crick base pairing and non watson-crick

A

watson and crick is when we are maximizing the number of H bonds and conferring the antiparallel; non watson and crick is found in only RNA

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7
Q

what is denaturation ?

A

it is the breakage of hydrogen bonds and the destabilization of the helix due to increasing temperature in a DNA solution

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8
Q

what is hyperchromicity

A

where DNA absorbs more UV light than it absorbance of 260 nm due to its denaturing

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9
Q

what is renaturation?

A

occurs when DNA is under slow cooling to allow for hybridization for bonds to reform

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10
Q

what affect the tempurature of DNA

A

its G:C content

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11
Q

what does the rate of renaturation in DNA depend on and what is it graphically represented as?

A
  1. Length
  2. Concentration
  3. Repeated sequence
    represented as a COT curve
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12
Q

what is A-DNA ?

A

right handed helix that is not typically in DNA but can form RNA. has 11 Base turns

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13
Q

what is watson-crick DNA?

A

right handed base turn is 10.5 and it a double helical form

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14
Q

what 4 things do non B DNA form

A
  1. G-quadruplex (Guanine)
  2. Triplex (H-DNA)
  3. Cruciform (hairpin_
  4. Slipped DNA
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15
Q

what is positive supercoiling ?

A

right handed turn ; decreases number of bases per turn

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16
Q

what is negative supercoiling ?

A

left handed turn ; increases number of base per turn