Metagenomics
Genomic study of uncultured microorganisms (shotgun sequencing)
Biggest demographic GI flora difference
Infant v. Adult
Diverse v Conserved (between subjects)
Species v Metabolic Pathways
Gut bacteria roles
Mostly anaerobic, little enteric
Gut immunity
Dendritic cells in LP of Peyer’s Patches sense bacteria -> Lymph nodes respond with IgA
Epithelial cell secretion against bacterial TLR binding
Reg III gamma, & alpha-defensins
Important defense against penetrating bacteria
Th17
Reduced normal flora predisposes to what bacterial infection
Clostridia Difficile
Normal C. Diff Tx
Vancomycin