MT Flashcards

(40 cards)

1
Q

What similarities are there between Embryophytes (land plants) and Charophytes (green algae)?

A

chlorophyll (photosynthetic pigments)

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2
Q

What differentiates algae from land plants?

A
  • lacks many complex plant tissues
  • lacks a multicellular embryo (i.e seeds)
  • not adapted to land
  • zygote develops separate from maternal tissues
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3
Q

What similarities are there between bryophytes and Charophytes?

A
  • no true root system
  • no stems/leaves
  • no vascular system
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4
Q

What evidence is there to support brown kelp having parallel evolution with plants?

A
  • has specialized tissues/cells that resemble that of plants (i.e sieve cells)
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5
Q

What can we learn about from the model organism Chlamydomonas r.?

A
  • how organisms sense light and undergo photosynthesis
  • what genes are responsible for forming cilia (animals) and flagella (plants)
  • evolution of multicellularity
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6
Q

What is the evidence behind how phylogenetic trees are created?

A
  • shared traits among species will be more abundant the closer they are related
  • species will have accumulated traits from their ancesters
  • historically went off of visible traits (macroscope or microscope)
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7
Q

What were the five kingdoms Whittaker proposed?

A

bacteria, animals, fungi, plants and protists

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8
Q

How did Whittaker classify his kingdoms?

A

bacteria = cells without organelles

animals/plants/fungi = nutritional modes

protists = whatever was left over

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9
Q

Where did algae fall in Whittaker’s classifications?

A

cyanobacteria –> bacteria

eukaryotic algae –> some in plants, some in protists

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10
Q

How does genetic classification sort species?

A
  • ribosomal DNA sequence similarities
  • similar nucleotide/amino acid sequences
  • the farther apart species are related, the more mutations will be present between the two
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11
Q

What is the difference between conserved and variable sequences?

A

conserved = critical for gene function so are less changed, differences are more clear in species distantly related

variable = change often throughout evolution, differences are more clear between closely related species

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12
Q

Why does horizontal gene transfer make phylogenies difficult?

A

DNA sequences may only be found on one subset of the tree, without suggesting inheritance and can also be suddenly lost

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13
Q

What two types of symbiotic relationships do algae have?

A
  • endosymbiosis (one organism is within the cell of another)
  • side by side
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14
Q

What is an example of a side by side symbiosis with algae?

A

lichens
- cyanobacteria fixes nitrogen
- green algae provides photosynthesis
- fungi anchor and process nutrients

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15
Q

What is an example of endosymbiosis with algae?

A

coral
- zooxanthellae within coral polyps provide photosynthesis
- coral provides nutrients and can pass down algae to offspring

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16
Q

Explain the endosymbiont theory

A
  • a free living bacterium was engulfed by an archaean cell
  • the bacterium’s genome became integrated with the eukaryote via gene transfer
  • the bacterium became unable to live independently from the eukaryote, and formed the mitochondria
  • cyanobacteria after developing oxygenic photosynthesis were absorbed by mitochondria containng eukaryotic cells, becoming chloroplasts
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17
Q

What makes cyanobacteria different from eukaryotic algae?

A
  • cyanobacteria lack nuclei and other membrane bound organelles
  • photosynthesis occurs in cyanobacteria membranes (thylakoids) vs the chloroplast
  • cyanobacteria are much smaller
18
Q

What evidence is there than cyanobacteria evolved before eukaryotic algae?

A

plastids in photosynthetic algae are derived from symbiotic cyanobacteria that were engulfed by ancient eukaryotes

19
Q

What ecological functions do cyanobacteria have?

A
  • nitrogen fixation
  • primary production
  • soil stabilization (i.e biocrusts)
  • stress tolerance
  • symbiosis with fungi/plants
  • blooms (aquatic)
20
Q

How do cyanobacteria do diazotrophy?

A
  • heterocyst cells create anaerobic conditions that activate nitrogenase
  • nitrogenase converts atmospheric N2 into organic NH3/NH4
21
Q

How do heterocysts maintain anaerobic conditions?

A
  • no photosystem II (oxygen producing stage)
  • thick cell walls and mucilage to limit gas exchange
  • high respiration rates
22
Q

What photosynthesis components do all algae share?

A

2 photosystems, 1 cytochrome complex, 1 electron transport chain and ATP synthase

23
Q

What are phycobilisomes and where are they found?

A
  • antennae like structures on thylakoids that contain light collecting pigments
  • found in cyanobacteria and red algae
24
Q

What is the general rundown of photosynthesis?

A
  1. PSII captures light
  2. light energy gets transfered to chlorophyll a molecules
  3. excited electrons are passed to plastoquinones
  4. electrons are recharged by splitting water
  5. PQ moves excited electrons to the cytochrome complex
  6. electrons are used to create a proton gradient to move proteins from outside thylakoid to inside
  7. PC brings the used electrons to PSI
25
What was Calvin's experiments with carbon?
tracked how much radioactive carbob-14 was transformed into organic carbon by green algae
26
What makes cyanobacteria different from other photosynthetic bacteria?
- does photosynthesis in oxygenic conditions - has both PSI and PSII - uses electrons from splitting water - contains chlorophyll a and b - photosynthesis occurs in thylakoids
27
Where does photosynthesis occur in purple bacteria (anaerobic)?
invaginations of the membrane and in chromatophores
28
What pigment do anaerobic bacteria use as opposed to chlorophyll?
bacteriochlorophyll (has a different structure to chlorophyll)
29
What are some problems behind the theory around atmospheric oxygen and algae?
- fossil record that far back is difficult to obtain - earliest cyanobacteria fossil is dated after the oxidation event - difficult to know if stromatolites were formed by cyanobacteria or by geological processes
30
What evidence supports the endosymbiont theory?
- mitochondria and chloroplasts share similar membrane proteins that are different from other cell organelles - mitochondria and chloroplasts can only be reproduced from other mitochondria/chloroplasts and not through other cells - mitochondrial/chloroplast DNA resembles bacterial circular DNA - mitochondria/chloroplasts synthesize proteins more similarly to bacteria than eukaryotes - photosynthesis in chloroplasts and cyanobacteria is very similar and share many same pigments - cyanobacteria engulfed lack a 3rd membrane that would have digested it within the cell - an export mechanism was developed in plastids which free-living cyanobacteria would not need to have - plastids have a protein importing mechanism that prevents total gene loss during symbiosis
31
How did scientists determine the origin of plastid evolution?
- genetic testing between archaeoplastids and cyanobacteria to find similarities - the cyanobacteria with the most relation is a freshwater/terrestrial species, so origin must have been there
32
What evidence suggests cyanobacteria contributed to chloroplast membranes?
- beta barrel proteins typically only found in cyanobacteria are also found in chloroplast/mitochondria membranes - both cyanobacteria and chloroplast membranes are rich in the same type of lipid
33
What evidence is there for gene integration between endosymbionts and their hosts?
- plastid genomes are smaller than their non-synbiont cyanobacterial counterparts - there are cyanobacterial genes in host eukaryotic genomes that are also missing in the chloroplast genome
34
What is special about P. chromatophora?
it is the first algae since the ancestral species to have gained a photosynthetic organelle (chromatophore) from cyanobacteria via horizontal gene transfer
35
What 3 ideas hypothesize how plastid transport systems developed?
- the cyanobacteria's original system evolved to be both an import and export system - the system was derived from the host eukaryotic cell's system - has both cyanobacteria and eukaryotic origins
36
What is the TIC-TOC system?
a system that moves proteins from the cytoplasm through the outside of the chloroplast membrane into the inside membrane
37
What is an alternative theory behind protein transport in endosymbionts?
- proteins that lack TIC-TOC signalling factors would be packaged into vesicles - vesicles would fuse with the chloroplast, delivering its contents
38
Why do scientists think that Archaeplastida is monophyletic?
- DNA suggests that all species share a common ancestor - transport proteins (i.e TIC-TOC) are similar in all species
39
What two phylogenetic groups have acquired secondary endosymbionts?
SAR and Excavata
40
What group has tertiary endosymbionts?
Dinoflagellates