What are the 4 core elements required for organic life?
Carbon, Oxygen, Nitrogen, Hydrogen
What is the electronegativity of Oxygen?
3.44
What is the electronegativity of Nitrogen
3.04
What is the electronegativity of Carbon?
2.55
What is the electronegativity of Hydrogen?
2.20
What electronegativity difference makes a polar bond?
A difference greater than 0.4
What is a common polar bond?
Hydroxyl (-OH)
What are the 7 important functional groups for organic life?
List the properties, makeup, and compound name of the hydroxyl group
properties:
- polar
- helps dissolve compounds (like sugars)
makeup: -OH
Compound name: Alcohol (specific names end in ol)
List the properties, makeup, and compound name of the carbonyl group
properties:
- sugars with ketone groups are ketoses (-one)
- sugars with aldehyde groups are aldoses (-al)
makeup: C=O
compound name: ketone (when C=O at end of C skeleton) or aldehyde (when C=O is at end of C skeleton)
List the properties, makeup, compound name and ionized form of the Carboxyl group
properties:
- acts as an acid (because bond between H and O is so polar)
makeup: -COOH (C double bonded to one O and single bonded to one hydroxyl)
Compound name: Carboxylic Acid or Organic Acid (-ic acid)
Ionized form: -COO- & H+
(C double bonded to one O and single bonded to O with negative charge. Hydrogen ion also released)
List the properties, makeup, compound name, and ionized form of the Amino group
properties:
- acts as a base (can take H+ from water)
makeup: -NH2
Compound name: Amine
Ionized form: -NH3+ (absorbes 1 H+)
List the properties, makeup, and compound name of the Sulfhydryl group
properties:
- two can react together, forming a “cross-link” which help stabilize proteins structure
makeup: -SH
Compound name: Thiol
List the properties, makeup, and compound name of the Phosphate group
properties:
- contributes negative charge in group of phosphates
- Orients molecules so it can react with water, releasing energy
makeup: -OPO3^2-
(P with 4 O’s around it. One double bonded, two charged negatively and one connected to the rest of the chain)
compound name: organic phosphate
List the properties, makeup, and compound name of the Methyl group
properties:
- affects expression of genes when on DNA
- affects shape/function of sex hormones
makeup: -CH3
compound name: methylated compound