Give the first step of the nitrogen cycle
Fixation (reduction) of atmospheric nitrogen by nitrogen-fixing bacteria to yield ammonia (NH3 or NH4+).
The process of ammonia converted to nitrate is called what?
Nitrification
The process whereby Nitrate is reduced to N2 under anaerobic conditions is called?
Denitrification
Bacteria that perform denitrification use what rather than O2 as the ultimate electron acceptor?
NO3- is used
What is the name of the bacteria that converts Ammonia and Nitrate into atmospheric N2?
Annamox bacteria
90% of the NH4- generated by vascular plants, algae and microorganisms comes from what process?
Nitrate Assimilation, a two-step process.
Give the first step of nitrogen assimilation
First NO3- is reduced to NO2- by nitrate reductase.
Give step two of Nitrate Assimilation
NO2- is reduced to NH4+ in a six-electron transfer catalyzed by nitrate reductase.
– in plants, electrons pass from ferredoxin through a 4Fe- 4S center to a novel hemelike molecule (siroheme) before reducing NO2−
– nonphotosynthetic microbes have a distinct enzyme for which NADPH is the electron donor
Where in plants is Nitrate Reductase located?
The chloroplasts.
Nitrite reductase receives its electrons from?
Ferredoxin (which is reduced in the light-dependent reactions of photosynthesis)
What is the name of bacteria that can fix nitrogen?
Diazotrophs
What is the most important product of nitrogen fixation?
Ammonia
Is the reduction of nitrogen to ammonia endergonic or exergonic?
Exergonic.
Why does nitrogen fixation have an extremely high activation energy?
Because the Nitrogen triple bond is very stable
Nitrogen fixation is carried out by a complex of proteins called what?
The nitrogenase complex.
Give the enzymes of the Nitrogenase complex
Dinitrogenase (a and b subunits) and Dinitrogenase reductase
Why is the presence of molybdenum in the Dinitrogenase heterotetramer important?
Because it catalyzes nitrogen fixation
Give the Nitrogenase Complex Rxn
N2 + 10H+ + 8e- + 16ATP —> 2NH4+ 16 ADP + 16 Pi
Is Dinitrogenase reductase a dimer or tetramer?
A dimer of two identical subunits.
How many electrons are required for nitrogen fixation?
Eight
Where are the eight electrons for nitrogen fixation derived from?
4 CoA and 4 Pyruvate
Define ‘nitrification’.
It is the process of converting ammonia to nitric oxide, nitrite, and finally nitrate.
Define ‘denitrification’.
It is the reduction of nitrate and nitrite to N under anaerobic conditions.
Where does Nitrate reductase receive its electrons from?
From NADH through cysteine, FAD, a cytochrome (cyt b557), and a novel cofactor containing molybdenum.