nucleic acids Flashcards

(35 cards)

1
Q

what is the role of DNA

A

information storage through genes

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2
Q

what are the different roles of rna

A

ribosomal RNA, mRNA (transcription to translation), tRNA(converts nucleotide sequences into amino acids), noncoding RNA (nRNA)

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3
Q

what are the three components of a nucleicleotide

A

nitrogenous base, phosphate group, pentose sugar

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4
Q

what are the double ring nitrogenous bases

A

purines

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5
Q

PURE As Gold

A

purines: adenine and guanine

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6
Q

what are the single ring nitrogenous bases

A

pyriminidines

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7
Q

CUT the PYe

A

Pyriminidines: cytosine, uracil, thymine

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8
Q

Guanine is the guy (with a dick)

A

carbonyl with amino group

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9
Q

Adenine structure

A

no carbonyls but an amino

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10
Q

thymine has

A

two tits and a dick (its trans! bc tautomers)

it has two carbonyls and a methy group

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11
Q

uracil is PURE

A

it has two tits but no dick

two carbonyls only

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12
Q

cytosine has a singular tit and dick

A

a carbonyl and an amino group

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13
Q

at what carbon is the nitrogeneous base attached?

A

it is attached at the 1’ carbon, the anomeric carbon

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14
Q

at what carbonis the phosphate group attached

A

on carbon 5’

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15
Q

what is the difference between a nucleotide and a nucleoside

A

a nucleoside does not have a phosphate group whereas a nucleotide does

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16
Q

where is the DNA missing a hydroxyl

A

at the 2’ carbon

17
Q

what type of glycosyl bind does the pentose sugar have with the nitrogeneous base

A

it has a beta N-glycosyl bond

18
Q

where is the N-glycosyl bond on a pyriminidine

19
Q

where is the N-glycosyl bond on a purine

20
Q

how is the phosphate group linked to the sugar

A

it is linked through a phosphodiester bond on the 5’ carbon

21
Q

What is the name for the DNA nucleoside and nucleotide of adenine

A

deoxyadenosine

deoxyadenylate or deoxyadenosine 5’-monophosphate

22
Q

What is the name for the DNA nucleoside and nucleotide of guanine

A

deoxyguanosine

deoxyguanylate or deoxyguanosine 5’-monophosphate

23
Q

what is the name for the DNA nucleoside and nucleotide for thymine

A

deoxythymidine

deoxythymidylate or deoxythymidine 5’-monophosphate

24
Q

what is the name for the DNA nucleoside and nucleotide for cytosine

A

deoxycytidine

Deoxycytidylate or deoxycytidine 5’-monophosphate

25
what is the name for the RNA nucleoside and nucleotide for adenine
adenosine adenylate or adenosine 5' monophosphate
26
what is different about naming RNA nucleotides
remove the deoxy and just have the name
27
whats the name for the RNA nucleoside and nucleotide for uracil
uridylate or (uridine 5'-monophosphate)
28
draw the structure for inosine
29
what are some common modifications of nucleotifes
methylation and hydroxylation
30
do nucleotides have to attach to phosphates at the 5'?
no! they can bind at the C2, C3, and even cyclize in RNA
31
what links nucleic acids
phosphodiester bonds between the sugars
32
what is the group at the top of the nucleic acid and what is at the bottom
5' phosphate and 3' hydroxyl
33
why is DNA more stable than RNA
the extra hydroxyl on the RNA sugar allows the OH to act as a nucleophile which can then attack the phosphate. Since the RNA molecule is so large, it can act as a leaving group and the molecule essentially hydrolyzes itself by nucleophilic attack
34
how can nucleic acids be drawn
p at 5' carbon and a OH at 3' carbon pA-G-C-T-A-OH
35