classes of Nucleobases
pyrimidines, longer name shorter molecule = C, T,U
pyrine, shorter name longer molecule = A, G
G –> C = 3 H bonds
A –> T = 2 H bonds
Ribose
OH on each corner = allow for more further possible bonding patterns
Deoxyribose
OH missing on 2nd C = leaves bonding for phosphates (carbons 3 and 5) and nucleobases (carbon 1)
phosphates
links 5’ to 3’ asymmetrically = gives direction to curl
provides back bone
Anti parallel duplex
more G -C pairs = more stable
to get a complimentary strand:
1. split into triplets
2. correct complimentary bases
3. reverse the order to get in the 5’ to 3’ direction
why is the double helix formed?
why is the double helix advantageous?
close packing so no water can get inside the helix
keeps the phosphates separated
alternative forms of DNA
B- DNA: right handed
A-DNA: right handed but looser in structure
Z-DNA: left handed = undergone methylation