Epigenetic
Altering of Gene expression/phenotypes/appearance without change in the gene structure
Epigenetic factors
Factors that make genes more or less likely to be expressed, may be inherited.
Geneome
A person’s Hereditary information that is encoded in their DNA
Epigenome definition
Is the sum of all the factors that determine when, where, and which genes are ‘switched on’ or expressed.
what does an epigenome do
It controls which genes are active in a cell, therefore which proteins will be produced.
What happens if an epigenome is abnormal
If an epigenome is abnormal a cell can be abnormal and a disease may occur
Ways where genes are regulated epigenetically
Chromatin method
Is one way that genes can be regulated epigenetically
DNA molecules are in the form of long strands that are 2-3m long, tightly coiled around the histone proteins in the nucleus.
When a cell is not dividing, the coiled DNA forms a tangled network.
It physically opens or closes DNA to control whether genes can be read.
Modified histones
A modified histone is a histone protein that has had chemical groups added to it (Methyl, acetyl), They change how tightly DNA is wrapped around the histones influencing gene expression.
Acetylation (histone modification)
Acetyl tails protrude from the histones
This affects how tightly the DNA can wrap around the histones and the distance between the histones.
Acetylation, therefore, produces more loosely bound DNA.
These sections of DNA can more easily interact with RNA polymerase complex to be transcribed.
More mRNA can be produced resulting in more protein produced.
It is more open to be expressed, or these genes are switched ‘on’
DNA methylation (chromatin remodelling)
Methyl groups are added to the DNA strand at CpG sites (cytosine – phosphate – guanine)
These groups interfere with RNA polymerase being able to bind to the DNA in order for the gene to be transcribed
Less transcription means that less protein is made.
Therefore, methylation inhibits gene expression, or switches the genes off
Gene regulation factors affecting gene
Acetylation - on
Deacetylation - off
methylation - off
demethyltion - on
Factors that cause epigenetic changes in DNA
Diet and Nutrition
Environmental toxins
Drugs and alcohol
stress and trauma
radiation and UV light
Physical activity
Temperature
how does epigenetics have a link with transcription
Transcription = making an mRNA copy of a gene → so the gene is ON and can make a protein.
Epigenetics controls whether transcription can happen by changing how tightly DNA is packed