list methods of detecting pathogens
Culture
* Grow the pathogen in the lab.
* Advantages: can identify the organism and test antibiotic sensitivity.
* Disadvantages: takes at least 2 days, needs special facilities and trained staff.
Antigen detection
* Looks for a piece of the pathogen (protein, carbohydrate, etc.).
* Methods:ELISA (lab-based). Lateral flow tests (like COVID test kits). Latex agglutination (beads clump if antigen present).
* Example: Taylorella equigenitalis detection in horses.
Genetic material
* Detect DNA or RNA (PCR and similar methods).
* Very sensitive, but can sometimes detect “dead” pathogen → doesn’t always mean active infection.
Inflammatory markers (non-specific, but help monitoring)
* Fibrinogen.
* CRP (dogs, pigs).
* Serum amyloid A (SAA) (cats, horses, cows).
* Haptoglobin (cows).
* Pig-MAP (pigs).
what are antibody tests
Show if an animal has been exposed to a pathogen.
Limitations: can’t always tell if infection is current or past.
Traditional tests:
Agglutination.
Haemagglutination inhibition.
Complement fixation.
ELISA types:
Indirect ELISA → detects antibodies in sample.
Competition ELISA → sample antibody competes with a labelled antibody.
Examples: African swine fever, Influenza A.
IgM antibody capture (IMAC) ELISA → detects recent/active infection.
Example: screening cats for toxoplasmosis before ciclosporin treatment.
Indirect tests (immune response rather than pathogen):
TB testing
SICCT (single intradermal comparative cervical tuberculin test): type IV hypersensitivity.
IFN-γ test: measures cell-mediated response.
what is sensitivity and specificity referring to
Sensitivity = how well it detects diseased animals (avoids false negatives).
Specificity = how well it excludes healthy animals (avoids false positives).
Example: A test with sensitivity 90% and specificity 96.5% → about 1 in 30 healthy cattle will test false positive.