What are the 3 centromere locations?
Metacentric: middle
Acrocentric: towards one end
Telocentric: at one end
Human chromosomes are what in terms of centromere location?
Metacentric and acrocentric
What are the steps to view metaphase chromosomes from white blood cells?
1) isolate blood (want WBC)
2) wait for WBC to grow (with WBC growth factor)
3) halt cell cycle in metaphase using a microtubule inhibitor
4) drop WBCs onto a slide (WBCs burst)
5) add Giemsa stain = metaphase spread
6) take photo and arrange chromosomes into standard pattern = karyogram
7) describe results in a statement = karyotype
Chromosomes have a p arm and q arm. What are these?
p arm (petite = small)
q arm (queue = tail)
What is a chromosome band?
stained segment of condensed chromosome visible under a microscope, such as made by a giemsa stain
Describe dark chromosome bands
Dark bands (G+) are A-T rich, gene poor, and heterochromatin (more tightly packed)
Describe light chromosome bands
Light bands (G-) are G-C rich, gene-rich, euchromatin (loosely packed, transcriptionally active)
What colour is a giemsa dark band? light band?
purple
pink
Are chromosome bands named in order?
No. Better prep shows more bands, therefore, it is not a good enough system
What is the actual system for naming chromosome sections?
using regions
numbered from centromere to each end
i.e. p arm region 1, q arm region 1, q arm region 2
Regions contain bands. Bands contain sub-bands, named by decimal points. How do you say 18p11.2?
chromosome 18, p arm, region 1, band 1, sub-band 2
How do you write chromosome map locations?
chromosome number, arm (p/q), region, band, sub-band
If chromosome number changes, how do you describe autosomes and sex chromosomes?
autosomes: + extra, - missing
sex chromosomes: list them
What are the possible chromosome structure changes? How do you write them in chromosome maps?
del: deletion
dup: duplication
inv: inversion
t: translocation
How do you pronounce 12p12?
(chromosome) 12, p arm, region 1, band 2