Lecture 1-2 Flashcards

(36 cards)

1
Q

composition of a virus

A

RNA or DNA core, a protein coat, and sometimes a surrounding enveloped

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Viruses lack ________________

A

independent metabolism

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

how many phases of existence for a virus

A

2

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

what does sense RNA mean

A

encodes proteins that can be directly translated

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

what does anti - sense RNA mean

A

encodes the complement to the encoding sequence - must be transcribed first

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

does an infection always lead to the death of the infected cell

A

no

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

5 steps of virus life cycle

A

virion entry
uncoating
gene expression and protein synthesis
virus genome amplification
virion assembly and egress

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

susceptible cell

A

has the receptors to let a virus in but it might not support the rest of the replication cycle

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

resistant cell

A

lacks the functional receptor so a virus cannot infect that cell - but it might have what it s=needs to replicate

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

permissive cell

A

has the capacity to replicate viruses but might nit have the virus receptor

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

what kind of cell can take up and replicate a virus

A

susceptible and permissive cells

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

what was the first virus discovered

A

tobacco mosaic virus

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

what virus grows in humans and chimpanzees only

A

HCV

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

where are viruses often grown

A

embryonate chicken eggs

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

primary cells

A

living tissue (plant/animal)
cannot replicate forever

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

immortalized cells

A

derived from primary cells but often mutated
can replicate endlessly

17
Q

what is a cytopathic effect (CPE)

A

a viral infection that changes the way that a cell looks in a culture

18
Q

whats syncytia

A

fusion of cells

19
Q

what do you need for syncytia

A

viral attachement protein
receptor

20
Q

3 ways to quantify viruses based on infectivity

A

plaque assay
end point dilution assay
one step growth curves

21
Q

3 ways to quantify viruses using physical methods

A

electron microscopy
antibody based methods
nucleic acid based methods

22
Q

physical methods vs infectivity

A

physical methods just tells us how many cells are there rather they are infectious or not - infectivity gives us how many are truly infectious

23
Q

what is put in a plaque assay to contain where viruses go

A

semisolid agarose

24
Q

what is a section of dead cells called

25
what does PFU measure
the number of infectious particles
26
how do you obtain the purest stock of a virus? how many times is it usually done
plaque purification - 3 times
27
explain plaque purification
1 plaque means a single infectious virus particle - by picking a plaque you are essentially isolating a clone of a virus. repeat 2-3 times
28
endpoint dilution assay - what could it be helpful for
viruses that maybe dont produce plaques
29
how do you ensure all cells are infected in your virus cultivation
use a high MULTIPLICITY OF INFECTION (MOI)
30
need an MOI of ______ to get a one step growth curve
5-10
31
when making virus stocks, an MOI of _______ is preferred. why?
0.001 to avoid propagating mutant defective viruses and low MOI is more like what would happen in a natural setting
32
whats the only thing you can see viruses with
electron microscopy: negative staining
33
what are antibody based assays (2)
ELISA lateral flow assay
34
what is a control line for for lateral flow assay
the prove that the test was valid
35
if the C ling is absent, what does that mean
that the test is faulty
36
what does the T line contain
antibodies to the antigen