Bacteriophages (phages)
Viruses that specifically infect bacteria; store genetic information in their protein head and inject it into host cells
Viruses
Non-living infectious particaled made of genetical material (DNA or RNA)
Chargaff’s rules
Discovered that adenine (A) always pairs with Thymine, and cytosine always pair with guanine, A+G = Purine, T+C = pyrimidines
Double Helix
The twisted-ladder structure of DNA formed by two complementary strands, base pairs form the “rungs,” and the sugar-phasephate backbone forms the “sides.”
DNA Replication
The process of copying DNA to produce identical genetic material for new cells.
Anti-parallel
The two DNA strands run in opposite directions (one 5’ –> 3’, and the other 3’–>5’) this arrangement is key for replication and base pairing
Semi-Conservative
Each new DNA molecule has one old (parental) strand, and one new strand
Conservative
The original DNA molecule is completely conserved, and an entirely new molecule is made
Dispersive
Each strand is a random mix of old and new DNA segments (this model was later disproven)
Origins of Replication
Specifc DNA sequences where replication begins, proteins recognkize these sites and open up the DNA to start copying
Replication Fork
The Y-shaped region where the double helix is unwound so replication can occur.
Helicase
The enzyme that unwinds and separates the two DNA strands at the replication fork.
Single-Stranded Binding Proteins (ssts)
Bind to separate strands to prevent them from repairing or folding back on themselves
Topoisomerase
Enzyme that relives strain and prevents DNA form over twisting (supercoiling) ahead of the replication fork
DNA Polymerase III
The main enzyme that adds new nucleotides to the growing DNA strand in the 5’3 direction
DNA Polymerase I
Removes RNA primes and replaces them with DNA nucleotides; also repairs errors
Primer
The short RNA segment made by primase; necessary for DNA synthesis to begin
Primase
Synthesizes short RNA primes that provide a starting point for DNA polymerase
Leading Strand
The strand of DNA synthesized continuously in the 5’3 direction toward the fork.
Lagging Strand
The strand synthesized discontinuously in short fragments (Okazaki fragments) away from the fork in the 5’3
Okazaki Fragments
Short DNA segments formed on the lagging strand; named after the Okazakis who discovered them
DNA ligase
Enzymes that join Okazaki fragments and seals breaks in the sugar-phosphate backbone
Mismatch Repair
Corrects incorrectly paired nucleotides after replication
Nucleotide Excision Repair
Damaged DNA sections are cut out and replaced using the undamaged strand as a template