explain how glucose is absorbed from intestinal lumen into portal vein
aim: transport glucose from intestinal lumen -> portal vein
1. primary active transport: The sodium-potassium pump maintains the electrochemical gradient of living cells by moving sodium out and potassium in of the cell
2. secondary active transport: SGLT1 symporter brings glucose into the enterocyte / intetinal epithelium cell. this is driven by Na+ and glucose transported (through 2ry AT) from the intestinal lumen into the intestinal epithelium.. (Na+ goes in and glucose goes along with it).

what is / how does DNA mismatch repair occur?
this type of repair, repairs insertion or delation mutations that occurs during DNA replication and recombination:
how does compaction of DNA occur?
1. compaction of histomes: (basic proteins that form subunit structures)
= v compact !
what is PCR used for?
how does PCR work?
PCR: amplifies a region of interest within the human genome, using a template DNA and specific primers
repeat x lots
what is sanger sequencing?
(golden standard for genetic testing)
(Sanger sequencing is the process of selective incorporation of chain-terminating dideoxynucleotides by DNA polymerase during in vitro DNA replication)
uses dideoxyribonucleic acids (ddNTP) to terminate polymerization reaction of DNA.
can find every single base pair in a sequence!
Q what is next generation sequencing? what are the different types?
- whole genome sequencing
- whole exome sequencing - sequencing all exons in genome (~2% of genome). no info on mutations outside of exons.
RNA sequencing (RNAseq) - sequencing all expressed RNA and expression analysis. (RNA is direct result of exons to RNA, but also RNAseq gives info about which genes are expressed and if highly / lowly expressed).
why is molecular diagnosis and targeted therapy good?
what can it be used for? (x4)
good: offers personalised approach to care. can tailor to specific genetic conditions of patient
- selection of embryos prior to implantation in IVF (carry out genetic testing on embryos and screen for mutations)
- personalised chemotherapy (take a biopsy of cancer and sequence DNA. if have specific changes to target molecules, can target those molecules with chemo. e.g. herceptin)
- gene therapy for genetic conditions (v experimental)
- pharmacogenomics
describe 3 prenatal diagnoses that can be undertaken to test for aneuploidy
2. chorionic villus sampling: genetic testing of tissue from placenta (choroinic villi), ultrasound guidance used transabdominal or transcervical. 12-14 weeks
3. non invasise technqiues: ultrasound imaging of back of neck of embryo at 11-14 weeks. if depth of fluid at back of neck is 3.5-4.4 mm = 70% chance of delivering baby with no major abnormalities.
what is Xist?
(X chromosome inactivation (XCI) in females thus leads to similar transcription levels of X-chromosomal genes between males and females, who now both express genes from a single X chromosome. )
what is the Barker hypothesis?
thrifty phenotype: if a baby in-utero is subject to poor nutrients (because of bad maternal diet), the epigenome is programmed to expect this environment post-natally. means there are developmental changes in cellular energy metabolism, such as: glucose handling, lipid metabolism and mt biogenesis. if exposed to nutrient poor environment postnally: means pre-disposed to have a survival offspring.
BUT
if born and given a nutrient rich environment -> get increased risk of susceptibility to metabolic disease, such as type 2 diabetes, obesity and CHD
how does DNA methylation of cytosine occur?
describe how chromatin architecture is changed (a factor than influences epigenome mechanism)
chromatin architecture modifcations
- ATP-depending remodelling:
1. the contact between DNA and histones,
2. the path of DNA wound around histones,
3. the structure of nucleosomes.
normally an immediate effect
explain how histone modifications occurs (a factor than influences epigenome)
where do most modifications occur?
which enzymes used?
histone modifications
- post-translational modification of histone proteins: acetylation (acetyl functional group added), methylation M (addition of methyl group) , phosphorylation P, ubiquitylation (U)
can change histone modifcations using enzymes:
a) histone acetylase (HAT): opens DNA to make it accessible
b) Histone deactylase (HDAC) associated with closing DNA to make it inaccessible
explain non-coding RNAs
(a factor than influences epigenome / regulates epigenome):
how does protein targeting to ER occur?

describe how initiation of transcription works
what are the two apoptopic pathways?
2 pathways:
extrinsic apoptopic pathway
- tumour necrosis factor (TNF) binds to death receptor. activates caspases
intrinsic apoptopic pathway:
what are caspases? whats mechanism involved?
Initiator caspases
Executioner caspases
Cause:
nuclear fragmentation, cytoskeleton disruption, membrane alterations, organelle reduction
what is role of ACh on:
a) skeletal muscle - how?
b) cardiac muscle - how?
c) acinar cells - how?
whats the mechanism of calcium ions being used as an intracellular messenger?
how are intracellular receptor proteins activated?
inactive receptor
active receptor
what happens with cell signalling when have a stroke?
- excitoxicity -> glumatate spreads outside area of initial damage = braindamage
give over view of cell signalling in normal cell - growth factor -> activate gene expression?

explain the ras pathway and how mutation leads to kras cancer
- mutated ras (kras): hydrolysis of bound GTP (first stage in pathway) occurs v slowly. GTP is bound to ras in unhydroloysed form - ras is permenantly switched on. continois proliferation and growth.